bugs.sims

Reads simulations from WinBUGS into R or S-PLUS,
 formats them, monitors convergence, performs convergence checks, and
 computes medians and quantiles - intended for internal use.

internal

file

Invoke a 'BUGS' model in 'OpenBUGS' or 'WinBUGS', a class "bugs" for 'BUGS'
results and functions to work with that class.
Function write.model() allows a 'BUGS' model file to be written.
The class and auxiliary functions could be used with other MCMC programs, including 'JAGS'.

Uwe Ligges

R2WinBUGS

Running 'WinBUGS' and 'OpenBUGS' from 'R' / 'S-PLUS'

bugs.sims function

<dl> <dt>parameters.to.save</dt>
<dd>parameters that should be monitored</dd> <dt>n.chains</dt>
<dd>number of Markov chains</dd> <dt>n.iter</dt>
<dd>number of total iterations (including burn in)</dd> <dt>n.burnin</dt>
<dd>length of burn in</dd> <dt>n.thin</dt>
<dd>size of thinning parameter</dd> <dt>DIC</dt>
<dd>calculation of DIC</dd></dl>

Arguments

WinBUGS output reader — bugs.sims

<dl>

 <dt>parameters.to.save</dt>
<dd>parameters that should be monitored</dd>

 <dt>n.chains</dt>
<dd>number of Markov chains</dd>

 <dt>n.iter</dt>
<dd>number of total iterations (including burn in)</dd>

 <dt>n.burnin</dt>
<dd>length of burn in</dd>

 <dt>n.thin</dt>
<dd>size of thinning parameter</dd>

 <dt>DIC</dt>
<dd>calculation of DIC</dd>

</dl>

bugs.sims: WinBUGS output reader

Description

Usage

Value

Arguments

See Also