baseFrequency: Absolute And Relative Frequency Of The Four Bases.
Description
This function returns the absolute and the relative frequency of the four bases (A, C, G, T).
Usage
baseFrequency(object)
Value
A data.frame with two columns containing the absolute and relative frequencies
respectively and six rows, one for each of the four bases (A, C, G, T), one for other symbols
contained in the reads and one summarizing the five aforementioned rows.
Details
This function makes use of the alphabetFrequency function from package
Biostrings.