RCircos.Get.Polygon.Height

Numeric vector, the data to be plotted on a data track.

data.heights

Numeric, the minimum value of data range.

min.value

Numeric, the maximum value of data range.

max.value

Non-negative numeric, the close position of a plot track relative to the center of plot area.

inside.pos

Non-negative numeric, the far position of a plot track relative to the center of plot area.

outside.pos

Calculate polygon heights (bottom and top location) inside a plot track. Polygon can be draw from inside position to outside position, from outside position to inside position, or from the middle to both direction of the track. This is mainly for internal use.

 methods 

A simple and flexible way to generate Circos 2D track plot images for genomic data visualization is implemented in this package. The types of plots include: heatmap, histogram, lines, scatterplot, tiles and plot items for further decorations include connector, link (lines and ribbons), and text (gene) label. All functions require only R graphics package that comes with R base installation.

RCircos.Get.Polygon.Height: Calculate the Height of Polygons in A Data Track

Description

Usage

Arguments

Value