RCircos.Set.Base.Plot.Positions

<p>Non-negative integer, total number of points to form a circular line.</p>

total.points

<p>Calculate x and y coordinates for a circular line that served as base plot positions to derive positions for all other plot items. Total number of coordinates are based on total chromosome units and padding. Degrees that text should be rotated at each point are also calculated. This function is for internal use.</p>

 methods 

A simple and flexible way to generate Circos 2D track plot images for genomic data visualization is implemented in this package. The types of plots include: heatmap, histogram, lines, scatterplot, tiles and plot items for further decorations include connector, link (lines and ribbons), and text (gene) label. All functions require only R graphics package that comes with R base installation.

RCircos.Set.Base.Plot.Positions: Setup Base Plot Positions

Description

Usage

Arguments