RCy3 (version 1.2.0)

createWindowFromSelection: createWindowFromSelection

Description

All selected nodes, their connecting edges, and associated attributes are copied into a new CytoscapeWindow, with the supplied title.

Usage

createWindowFromSelection(obj, new.windowTitle, return.graph)

Arguments

obj

a CytoscapeWindowClass object.

new.windowTitle

a String.

return.graph

an logical object.

Value

A new CytoscapeWindow object, with the graph slot populated with the new selected subgraph, if requested. If not requested, the graph slot holds an empty graph.

See Also

selectNodes

Examples

  # first, delete existing windows to save memory:
  deleteAllWindows(CytoscapeConnection())

  cy <- CytoscapeConnection ()
  title <- 'createWindowFromSelection demo'

  cw <- CytoscapeWindow (title, makeSimpleGraph ())
  displayGraph (cw)
  layoutNetwork (cw)
  selectNodes (cw, c ('A', 'C'))
 
  new.window.title <- 'NEW WINDOW'
  c2 <- createWindowFromSelection (cw, new.window.title, TRUE)
  layoutNetwork (c2, 'force-directed')
  print (getEdgeCount(c2))  # should be 1