RCy3 (version 1.2.0)

getLayoutPropertyValue: getLayoutPropertyValue

Description

Returns the appropriately typed value of the specified tunable property for the specified layout.

Usage

getLayoutPropertyValue(obj, layout.name, property.name)

Arguments

obj

a CytoscapeConnectionClass object.

layout.name

a string object.

property.name

a string object.

Value

Typically an integer, numeric or string value, the current setting of this property for this layout.

See Also

layout getLayoutNames getLayoutNameMapping getLayoutPropertyNames getLayoutPropertyType setLayoutProperties

Examples

  # first, delete existing windows to save memory:
  deleteAllWindows(CytoscapeConnection())

  cy <- CytoscapeConnection ()
  prop.names <- getLayoutPropertyNames (cy, 'isom')
  print (prop.names)
    # "maxEpoch"           "radiusConstantTime" "radius"             "minRadius"
    # "initialAdaptation"  "minAdaptation"      "sizeFactor"         "coolingFactor"
    # "singlePartition" 
  sapply (prop.names, function (pn) getLayoutPropertyValue (cy, 'isom', 'coolingFactor'))
    # maxEpoch radiusConstantTime             radius          minRadius 
    #       2                  2                  2                  2 
    # initialAdaptation      minAdaptation         sizeFactor      coolingFactor 
    #               2                  2                  2                  2 
    # singlePartition 
    #               2