RCy3 (version 1.2.0)

setDefaultEdgeTargetArrowColor: setDefaultEdgeTargetArrowColor

Description

In the specified CytoscapeConnection, stipulate the default color for all edge target arrows other than those mentioned in an edge target arrow color rule.

Usage

setDefaultEdgeTargetArrowColor(obj, new.color, vizmap.style.name = "default")

Arguments

obj

a CytoscapeConnectionClass object.

new.color

a String object, a hex string, of the form '#RRGGBB'.

vizmap.style.name

a String object, if this vizmap style needs to be distinguished from the default type.

Value

None.

See Also

setDefaultNodeShape setDefaultNodeColor setDefaultNodeSize setDefaultNodeColor setDefaultNodeBorderColor setDefaultNodeBorderWidth setDefaultNodeFontSize setDefaultNodeLabelColor setDefaultEdgeLineWidth setDefaultEdgeFontSize setEdgeColorRule

Examples

  # first, delete existing windows to save memory:
  deleteAllWindows(CytoscapeConnection())

  cw <- CytoscapeWindow ('setDefaultEdgeTargetArrowColor test', graph=makeSimpleGraph())
  displayGraph (cw)
  layoutNetwork(cw, 'force-directed')
  setDefaultEdgeTargetArrowColor (cw, '#0F0F0F')
  setEdgeTargetArrowShapeDirect (cw, c('C (undefined) A', 'B (synthetic lethal) C'), 'ARROW_SHORT')
  # redraw (cw) --> not required anymore