RCy3 (version 1.2.0)

setDefaultNodeColor: setDefaultNodeColor

Description

In the specified CytoscapeWindow, stipulate the default color for all nodes other than those mentioned in a node border color rule.

Usage

setDefaultNodeColor(obj, new.color, vizmap.style.name = "default")

Arguments

obj

a CytoscapeConnectionClass object.

new.color

a String object, a hex string, of the form '#RRGGBB'.

vizmap.style.name

a String object.

Value

None.

See Also

setDefaultNodeShape setDefaultNodeColor setDefaultNodeSize setDefaultNodeColor setDefaultNodeBorderColor setDefaultNodeBorderWidth setDefaultNodeFontSize setDefaultNodeLabelColor setDefaultEdgeLineWidth setEdgeColorRule setNodeBorderColorRule

Examples

  # first, delete existing windows to save memory:
  deleteAllWindows(CytoscapeConnection())

  cw <- CytoscapeWindow ('setDefaultNodeColor.test', graph=makeSimpleGraph())
  displayGraph (cw)
  layoutNetwork(cw, 'force-directed')
  setDefaultNodeColor (cw, '#FF8888') # light red
  # redraw (cw) --> not required anymore