RCy3 (version 1.2.0)

setDefaultNodeSize: setDefaultNodeSize

Description

In the specified CytoscapeConnection, stipulate the default size for all nodes other than those mentioned in a node size rule.

Usage

setDefaultNodeSize(obj, new.size, vizmap.style.name = "default")

Arguments

obj

a CytoscapeConnectionClass object.

new.size

a integer object, typically 20 to 100.

vizmap.style.name

a String object.

Value

None.

See Also

setDefaultNodeShape setDefaultNodeColor setDefaultNodeSize setDefaultNodeColor setDefaultNodeBorderColor setDefaultNodeBorderWidth setDefaultNodeFontSize setDefaultNodeLabelColor setDefaultEdgeLineWidth setEdgeColorRule setNodeBorderColorRule

Examples

  # first, delete existing windows to save memory:
  deleteAllWindows(CytoscapeConnection())

  cw <- CytoscapeWindow ('setDefaultNodeSize.test', graph=makeSimpleGraph())
  displayGraph (cw)
  layoutNetwork(cw, 'grid')
  setDefaultNodeSize (cw, 60) # an intermediate value
  # redraw (cw) --> not required anymore