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RFGLS (version 1.0)

a family GWAS data-analysis tool that uses a generalized least squares method to perform single-marker association analysis.

Description

RFGLS is a family GWAS data-analysis tool that uses a generalized least squares method to perform single-marker association analysis.

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Version

Install

install.packages('RFGLS')

Monthly Downloads

23

Version

1.0

License

GPL (>= 2)

Maintainer

Saonli Basu

Last Published

November 30th, 2012

Functions in RFGLS (1.0)

map

SNP "map" file
fgls

Feasible Generalized Least Squares regression with family GWAS data.
pedigree

Pedigree table
gls.batch.get

Data restructuring for fgls().
resVCmtx

Residual variance-covariance matrix.
geno

Simulated genotypic dataset
RFGLS-package

Rapid Feasible Generalized Least Squares
gls.batch

Generalized least-squares batch analysis.
pheno

Simulated quantitative-trait dataset