generateBoxPlotOneAnalyte: Wrapper function to generate one boxplot for a specified analyte

Description

Wrapper function to generate one boxplot for a specified analyte

Usage

generateBoxPlotOneAnalyte(
  errorListAll,
  colList,
  nameList,
  catList,
  catLabels,
  a,
  errorParam,
  outline = TRUE,
  withMean = TRUE,
  withCats = TRUE,
  withDirect = TRUE,
  titlePart = NULL,
  outputDir,
  filenamePart = NULL,
  ylim1 = c(0, 100),
  ylim2 = c(100, 1000),
  ...
)

Value

No return value. Instead, a plot is generated.

Arguments

errorListAll: (list) containing the overall benchmark results per algorithm
colList: (character) vector specifying the colors used for the different algorithms (should correspond to columns of benchmark results)
nameList: (character) vector specifying the names used in the legend (should correspond to columns of benchmark results), if NULL, colnames will be used
catList: (character) vector specifying the categories for which the boxes should be drawn
catLabels: (character) vector specifying the labels to the associated categories used for the x-axis
a: (character) specifying the analyte for which the boxplot should be generated
errorParam: (charcter) specifying for which error measure the plot should be generated
outline: (logical) indicating whether outliers should be drawn (TRUE, default), or not (FALSE)
withMean: (logical) indicating whether the mean should be plotted as well (default: TRUE)
withCats: (logical) set to TRUE if categories (e.g. pathological fraction) should be plotted (default: FALSE)
withDirect: (logical) indicating whether the box of the direct method should be elongated to facilitate comparison (default:TRUE)
titlePart: (character) specifying the latter part of the title
outputDir: (character) specifying a output directory
filenamePart: (character) specifying a filename for the plot
ylim1: (numeric) vector specifying the limits in y-direction for the first granular scale
ylim2: (numeric) vector specifying the limits in y-direction for the second less detailed scale
...: additional arguments passed forward to other functions

Author

Tatjana Ammer tatjana.ammer@roche.com