readNifti

This function reads files in NIfTI-1 or NIfTI-2 format into R, using the
standard NIfTI C library. It extends the equivalent function from the
<code>RNifti</code> package with source and target image parameters.

Provides an 'R' interface to the 'NiftyReg' image registration tools
<https://github.com/KCL-BMEIS/niftyreg>. Linear and nonlinear registration
are supported, in two and three dimensions.

Jon Clayden

RNiftyReg

Image Registration Using the 'NiftyReg' Library

Marc Modat

Benoit Presles

Thanasis Anthopoulos

Pankaj Daga

readNifti function

<dl><dt>file</dt>
<dd>A character vector of file names.</dd>
<dt>source, target</dt>
<dd>If the specified <code>file</code> contains a transformation,
these parameters can be used to specify the associated source and target
images, which are stored in attributes of the same name. Only used if
<code>file</code> is of unit length.</dd>
<dt>internal</dt>
<dd>Logical value. If <code>FALSE</code> (the default), an array
of class <code>"niftiImage"</code>, containing the image pixel or voxel values,
will be returned. If <code>TRUE</code>, the return value will be an object of
class <code>"internalImage"</code>, which contains only minimal metadata about
the image. Either way, the return value has an attribute which points to a
C data structure containing the full image.</dd></dl>

Arguments

Jon Clayden &lt;code@clayden.org&gt;

Author

Read a NIfTI format file — readNifti

<dl>

<dt>file</dt>
<dd>A character vector of file names.</dd>


<dt>source, target</dt>
<dd>If the specified <code>file</code> contains a transformation,
these parameters can be used to specify the associated source and target
images, which are stored in attributes of the same name. Only used if
<code>file</code> is of unit length.</dd>


<dt>internal</dt>
<dd>Logical value. If <code>FALSE</code> (the default), an array
of class <code>"niftiImage"</code>, containing the image pixel or voxel values,
will be returned. If <code>TRUE</code>, the return value will be an object of
class <code>"internalImage"</code>, which contains only minimal metadata about
the image. Either way, the return value has an attribute which points to a
C data structure containing the full image.</dd>

</dl>

readNifti: Read a NIfTI format file

Description

Usage

Value

Arguments

Author