getData

A <code><links4class>FirehoseData</links4class></code> object

object

A data type to be exported (Data types can be seen by typing show(objectname))

type

A list id for data types that may come from multiple platform (such as mRNAArray)

platform

A copy number data type (Default: 'All') (Possible values 'All' or 'Thresholed')

The Cancer Genome Atlas (TCGA) Data Portal provides a
platform for researchers to search, download, and analyze data
sets generated by TCGA. It contains clinical information,
genomic characterization data, and high level sequence analysis
of the tumor genomes. The key is to understand genomics to
improve cancer care. RTCGA package offers download and
integration of the variety and volume of TCGA data using
patient barcode key, what enables easier data possession. This
may have an benefcial infuence on impact on development of
science and improvement of patients' treatment. Furthermore,
RTCGA package transforms TCGA data to tidy form which is
convenient to use.

getData: Export data from FirehoseData object

Description

Usage

Arguments

Value

Examples