plotoutlierprobs

This functions plots a barchart of outlier probabilities across all cells in each cluster.

Application of 'RaceID' allows inference of cell types and prediction of lineage trees by the 'StemID2' algorithm (Herman, J.S., Sagar, Grun D. (2018) <DOI:10.1038/nmeth.4662>). 'VarID2' is part of this package and allows quantification of biological gene expression noise at single-cell resolution (Rosales-Alvarez, R.E., Rettkowski, J., Herman, J.S., Dumbovic, G., Cabezas-Wallscheid, N., Grun, D. (2023) <DOI:10.1186/s13059-023-02974-1>).

Dominic Grc3<bc>n

RaceID

Identification of Cell Types, Inference of Lineage Trees, and
Prediction of Noise Dynamics from Single-Cell RNA-Seq Data

Dominic Grün

plotoutlierprobs function

<dl><dt>object</dt>
<dd><code>SCseq</code> class object.</dd></dl>

Arguments

Plot Outlier Probabilities — plotoutlierprobs

<dl>

<dt>object</dt>
<dd><code>SCseq</code> class object.</dd>

</dl>

plotoutlierprobs: Plot Outlier Probabilities

Description

Usage

Value

Arguments