summary.BootRefFreeEwasModel

<p>BootRefFreeEwasModel object to summarize</p>

object

&#8230;

<p>Summary method for objects of type BootRefFreeEwasModel; calculates bootstrap mean and standard deviation.</p>


Reference-free method for conducting EWAS while deconvoluting DNA methylation
arising as mixtures of cell types.  The older method
(Houseman et al., 2014,<doi:10.1093/bioinformatics/btu029>) is similar to
surrogate variable analysis (SVA and ISVA), except that it makes additional use
of a biological mixture assumption.
The newer method (Houseman et al., 2016, <doi:10.1186/s12859-016-1140-4>) is similar
to non-negative matrix factorization, with additional constraints
and additional utilities.

summary.BootRefFreeEwasModel: summary.BootRefFreeEwasModel

Description

Usage

Arguments

Details