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Rlabkey (version 2.1.121)

Data exchange between R and LabKey Server

Description

This package allows an R user to discover, query and modify data in LabKey Server

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Version

Install

install.packages('Rlabkey')

Monthly Downloads

1,318

Version

2.1.121

License

Apache License 2.0

Maintainer

Cory Nathe

Last Published

February 14th, 2013

Functions in Rlabkey (2.1.121)

getLookups

Get related data fields that are available to include in a query on a given query object
lsSchemas

List the available schemas
labkey.getQueryViews

Retrieve a list of available named views defined on a query in a schema
Rlabkey-package

Exchange data between LabKey Server and R
RlabkeyUsersGuide

Open the Rlabkey Users Guide
labkey.saveBatch

Save an assay batch object to a labkey database
getRows

Retrieve data from LabKey Server
makeFilter

Builds filters to be used in labkey.selectRows and getRows
labkey.executeSql

Retrieve data from a LabKey Server using SQL commands
labkey.getQueries

Retrieve a list of available queries for a specified LabKey schema
lsFolders

List the available folder paths
getFolderPath

Reutrns the folder path associated with a session
labkey.getDefaultViewDetails

Retrieve the fields of a LabKey query view
labkey.getLookupDetails

Retrieve detailed information on a LabKey query
getSchema

Returns an object representing a Labkey schema
lsProjects

List the projects available at a given Labkey Server address
labkey.deleteRows

Delete rows of data from a LabKey database
labkey.insertRows

Insert new rows of data into a LabKey Server
getSession

Creates and returns a LabKey Server session
labkey.getFolders

Retrieve a list of folders accessible to the current user
saveResults

Returns an object representing a Labkey schema
labkey.getSchemas

Retrieve a list of available schemas from a labkey database
labkey.getQueryDetails

Retrieve detailed information on a LabKey query
labkey.updateRows

Update existing rows of data in a labkey database
labkey.makeRemotePath

Build a file path to data on a remote machine
labkey.selectRows

Retrieve data from a labkey database