pymagic_is_available

<p>This is used primarily to avoid running tests on CRAN
and elsewhere where the Python package should not be
installed.</p>

MAGIC (Markov affinity-based graph imputation of cells) is a method for addressing technical noise in single-cell data, including under-sampling of mRNA molecules, often termed "dropout" which can severely obscure important gene-gene relationships. MAGIC shares information across similar cells, via data diffusion, to denoise the cell count matrix and fill in missing transcripts. Read more: van Dijk et al. (2018) <DOI:10.1016/j.cell.2018.05.061>.

Scott Gigante

Rmagic

pymagic_is_available: Check whether MAGIC Python package is available and can be loaded

Description

Usage

Arguments