Rnits (version 1.6.2)

getFitModel: Extract fit data from Rnits object

Description

Retrieve model fit data from Rnits object after fit has been run.

Usage

getFitModel(object)
"getFitModel"(object)

Arguments

object

Rnits

Value

A data frame containing the model fit results for all genes

Details

Contains Ratio statistic, p-value and cluster ID data

Examples

# load pre-compiled expressionSet object for Ronen and Botstein yeast  chemostat data
data(yeastchemostat)
rnitsobj = build.Rnits(yeastchemostat, logscale = TRUE, normmethod = 'Between')
## Not run: 
# # Fit model using gene-level summarization
# rnitsobj <- fit(rnitsobj, gene.level = TRUE, clusterallsamples = FALSE)
# 
# # P-values, ratio statistics and cluster ID's can be retrieved for all genes together
# fitdata <- getFitModel(rnitsobj)
# ## End(Not run)