rhoScores

Calculate Rho score for normalized rank vector

Methods for aggregating ranked lists, especially lists of
genes. It implements the Robust Rank Aggregation Kolde et al (2012)
<doi:10.1093/bioinformatics/btr709> and some other simple algorithms
for the task. RRA method uses a probabilistic model for aggregation that
is robust to noise and also facilitates the calculation of significance
probabilities for all the elements in the final ranking.

Raivo Kolde

RobustRankAggreg

Methods for Robust Rank Aggregation

Sven Laur

rhoScores function

<dl><dt>r</dt>
<dd>vector of values in [0, 1]</dd>
<dt>topCutoff</dt>
<dd>a vector of cutoff values used to limit the number of elements in the 
input lists</dd>
<dt>exact</dt>
<dd>indicator if exact p-values should be calculated (Warning: it is computationally unstable and does to give considerable gain)</dd></dl>

Arguments

Raivo Kolde &lt;rkolde@gmail.com&gt;

Author

Calculate rho scores — rhoScores

<dl>

<dt>r</dt>
<dd>vector of values in [0, 1]</dd>


<dt>topCutoff</dt>
<dd>a vector of cutoff values used to limit the number of elements in the 
input lists</dd>


<dt>exact</dt>
<dd>indicator if exact p-values should be calculated (Warning: it is computationally unstable and does to give considerable gain)</dd>

</dl>

rhoScores: Calculate rho scores

Description

Usage

Value

Arguments

Author

Details

References

Examples