identifiedSTRs

The identified STR regions of the sampleSequences.fastq file, created by the identifySTRRegions function.

data

Loading, identifying, aggregating, manipulating, and analysing short tandem repeat regions of massively parallel sequencing data in forensic genetics. The analyses and framework implemented in this package relies on the papers of Vilsen et al. (2017) <doi:10.1016/j.fsigen.2017.01.017> and Vilsen et al. (2018) <doi:10.1016/j.fsigen.2018.04.003>. Note: that the parallelisation in the package relies on mclapply() and, thus, speed-ups will only be seen on UNIX based systems.

Sc3<b8>ren Vilsen

STRMPS

Analysis of Short Tandem Repeat (STR) Massively Parallel
Sequencing (MPS) Data

identifiedSTRs function

A list with an element for each of the 10 identified markers indicating which sequences were identified for each marker.

Format

Søren B. Vilsen <a href="/link/svilsen%40math.aau.dk?package=STRMPS&version=0.6.8" data-mini-rdoc="STRMPS::svilsen@math.aau.dk">svilsen@math.aau.dk</a>

Author

Identified STR regions — identifiedSTRs

Søren B. Vilsen <a href='mailto:svilsen@math.aau.dk'>svilsen@math.aau.dk</a>

identifiedSTRs: Identified STR regions

Description

Usage

Arguments

Format

Author