phredQualityScore

solexaQualityScore

Calculates the quality score (Phred or Solexa) given a probability of error.

Loading, identifying, aggregating, manipulating, and analysing short tandem repeat regions of massively parallel sequencing data in forensic genetics. The analyses and framework implemented in this package relies on the papers of Vilsen et al. (2017) <doi:10.1016/j.fsigen.2017.01.017> and Vilsen et al. (2018) <doi:10.1016/j.fsigen.2018.04.003>. Note: that the parallelisation in the package relies on mclapply() and, thus, speed-ups will only be seen on UNIX based systems.

Sc3<b8>ren Vilsen

STRMPS

Analysis of Short Tandem Repeat (STR) Massively Parallel
Sequencing (MPS) Data

phredQualityScore function

<dl><dt>p</dt>
<dd>Probability of error.</dd></dl>

Arguments

Convert probability to quality score — phredQualityScore

<dl>

<dt>p</dt>
<dd>Probability of error.</dd>

</dl>

phredQualityScore: Convert probability to quality score

Description

Usage

Value

Arguments

Examples