Segmentor3IsBack (version 2.0)

getOverdispersion: Generic function

Description

Generic function

Usage

getOverdispersion(object)

Arguments

object

An object of class Segmentor

Value

If model is Negative Binomial, the value of the overdispersion used for the analysis.

Details

Returns the slot Overdispersion of an object of class Segmentor

References

PDPA: Rigaill, G. Pruned dynamic programming for optimal multiple change-point detection: Submitted http://arxiv.org/abs/1004.0887

PDPA: Cleynen, A. and Koskas, M. and Lebarbier, E. and Rigaill, G. and Robin, S. Segmentor3IsBack (2014): an R package for the fast and exact segmentation of Seq-data Algorithms for Molecular Biology

overdispersion parameter: Johnson, N. and Kemps, A. and Kotz, S. (2005) Univariate Discrete Distributions: John Wiley & Sons

See Also

getMean

Examples

x=new("Segmentor") # new Segmentor object
getOverdispersion(x) # retrieves the overdispersion slot from x