Seurat (version 1.2.1)

fetch.data: Access cellular data

Description

Retreives data (gene expression, PCA scores, etc, metrics, etc.) for a set of cells in a Seurat object

Usage

fetch.data(object, vars.all = NULL, cells.use = NULL, use.imputed = FALSE, use.scaled = FALSE)

Arguments

object

Seurat object

vars.all

List of all variables to fetch

cells.use

Cells to collect data for (default is all cells)

use.imputed

For gene expression, use imputed values

use.scaled

For gene expression, use scaled values

Value

A data frame with cells as rows and cellular data as columns