Seurat (version 1.2.1)

plotNoiseModel: Visualize expression/dropout curve

Description

Plot the probability of detection vs average expression of a gene.

Usage

plotNoiseModel(object, cell.ids = c(1, 2), col.use = "black", lwd.use = 2, do.new = TRUE, x.lim = 10, ...)

Arguments

object

Seurat object

cell.ids

Cells to use

col.use

Color code or name

lwd.use

Line width for curve

do.new

Create a new plot (default) or add to existing

x.lim

Maximum value for X axis

...

Additional arguments to pass to lines function

Value

Returns no value, displays a plot

Details

Assumes that this 'noise' model has been precomputed with calcNoiseModels