Seurat (version 3.1.0)

BarcodeInflectionsPlot: Plot the Barcode Distribution and Calculated Inflection Points

Description

This function plots the calculated inflection points derived from the barcode-rank distribution.

Usage

BarcodeInflectionsPlot(object)

Arguments

object

Seurat object

Value

Returns a `ggplot2` object showing the by-group inflection points and provided (or default) rank threshold values in grey.

Details

See [CalculateBarcodeInflections()] to calculate inflection points and [SubsetByBarcodeInflections()] to subsequently subset the Seurat object.

See Also

CalculateBarcodeInflections SubsetByBarcodeInflections

Examples

# NOT RUN {
pbmc_small <- CalculateBarcodeInflections(pbmc_small, group.column = 'groups')
BarcodeInflectionsPlot(pbmc_small)

# }