Get Tissue Coordinates
# S3 method for SlideSeq
GetTissueCoordinates(object, ...)# S3 method for STARmap
GetTissueCoordinates(object, qhulls = FALSE, ...)
# S3 method for VisiumV1
GetTissueCoordinates(
object,
scale = "lowres",
cols = c("imagerow", "imagecol"),
...
)
An object
Arguments passed to other methods
return qhulls instead of centroids
A factor to scale the coordinates by; choose from: 'tissue',
'fiducial', 'hires', 'lowres', or NULL for no scaling
Columns of tissue coordinates data.frame to pull