Seurat (version 4.0.1)

GroupCorrelationPlot: Boxplot of correlation of a variable (e.g. number of UMIs) with expression data

Description

Boxplot of correlation of a variable (e.g. number of UMIs) with expression data

Usage

GroupCorrelationPlot(
  object,
  assay = NULL,
  feature.group = "feature.grp",
  cor = "nCount_RNA_cor"
)

Arguments

object

Seurat object

assay

Assay where the feature grouping info and correlations are stored

feature.group

Name of the column in meta.features where the feature grouping info is stored

cor

Name of the column in meta.features where correlation info is stored

Value

Returns a ggplot boxplot of correlations split by group