Load STARmap data
LoadSTARmap(
data.dir,
counts.file = "cell_barcode_count.csv",
gene.file = "genes.csv",
qhull.file = "qhulls.tsv",
centroid.file = "centroids.tsv",
assay = "Spatial",
image = "image"
)location of data directory that contains the counts matrix, gene name, qhull, and centroid files.
name of file containing the counts matrix (csv)
name of file containing the gene names (csv)
name of file containing the hull coordinates (tsv)
name of file containing the centroid positions (tsv)
Name of assay to associate spatial data to
Name of "image" object storing spatial coordinates
A Seurat object