TopNeighbors

<code><a rd-options="" href="/link/Neighbor?package=Seurat&version=4.0.1" data-mini-rdoc="Seurat::Neighbor">Neighbor</a></code> object

object

cell

Return a vector of cell names of the nearest n cells.

A toolkit for quality control, analysis, and exploration of single cell RNA sequencing data. 'Seurat' aims to enable users to identify and interpret sources of heterogeneity from single cell transcriptomic measurements, and to integrate diverse types of single cell data. See Satija R, Farrell J, Gennert D, et al (2015) <doi:10.1038/nbt.3192>, Macosko E, Basu A, Satija R, et al (2015) <doi:10.1016/j.cell.2015.05.002>, Stuart T, Butler A, et al (2019) <doi:10.1016/j.cell.2019.05.031>, and Hao, Hao, et al (2020) <doi:10.1101/2020.10.12.335331> for more details.

Paul Hoffman

Seurat

Tools for Single Cell Genomics

Andrew Butler

Saket Choudhary

Charlotte Darby

Jeff Farrell

Christoph Hafemeister

Yuhan Hao

Jaison Jain

Efthymia Papalexi

Patrick Roelli

Rahul Satija

Karthik Shekhar

Avi Srivastava

Tim Stuart

Kristof Torkenczy

Shiwei Zheng

Satija Lab and Collaborators 

TopNeighbors function

<code><a rd-options='' href='Neighbor'>Neighbor</a></code> object

Get nearest neighbors for given cell — TopNeighbors

Get nearest neighbors for given cell

TopNeighbors: Get nearest neighbors for given cell

Description

Usage

Arguments

Value