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Seurat (version 4.3.0.1)

IFeaturePlot: Visualize features in dimensional reduction space interactively

Description

Visualize features in dimensional reduction space interactively

Usage

IFeaturePlot(object, feature, dims = c(1, 2), reduction = NULL, slot = "data")

Value

Returns the final plot as a ggplot object

Arguments

object

Seurat object

feature

Feature to plot

dims

Dimensions to plot, must be a two-length numeric vector specifying x- and y-dimensions

reduction

Which dimensionality reduction to use. If not specified, first searches for umap, then tsne, then pca

slot

Which slot to pull expression data from?