Integrate Layers
IntegrateLayers(
object,
method,
orig.reduction = "pca",
assay = NULL,
features = NULL,
layers = NULL,
scale.layer = "scale.data",
...
)
object
with integration data added to it
A Seurat
object
Integration method function
Name of dimensional reduction for correction
Name of assay for integration
A vector of features to use for integration
Names of normalized layers in assay
Name(s) of scaled layer(s) in assay
Arguments passed on to method
The following integration method functions are available: Seurat:::.rd_methods("integration")
Writing integration method functions