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Seurat (version 5.0.3)

Read10X_Image: Load a 10X Genomics Visium Image

Description

Load a 10X Genomics Visium Image

Usage

Read10X_Image(image.dir, filter.matrix = TRUE, ...)

Value

A VisiumV1 object

Arguments

image.dir

Path to directory with 10X Genomics visium image data; should include files tissue_lowres_iamge.png, scalefactors_json.json and tissue_positions_list.csv

filter.matrix

Filter spot/feature matrix to only include spots that have been determined to be over tissue.

...

Ignored for now

See Also

VisiumV1 Load10X_Spatial