Read10X_Image: Load a 10X Genomics Visium Image
Description
Load a 10X Genomics Visium Image
Usage
Read10X_Image(image.dir, filter.matrix = TRUE, ...)
Arguments
- image.dir
Path to directory with 10X Genomics visium image data;
should include files tissue_lowres_iamge.png
,
scalefactors_json.json
and tissue_positions_list.csv
- filter.matrix
Filter spot/feature matrix to only include spots that
have been determined to be over tissue.
- ...
Ignored for now