Read10X_probe_metadata

This function reads the probe metadata from a 10x Genomics probe barcode matrix file in HDF5 format.

A toolkit for quality control, analysis, and exploration of single cell RNA sequencing data. 'Seurat' aims to enable users to identify and interpret sources of heterogeneity from single cell transcriptomic measurements, and to integrate diverse types of single cell data. See Satija R, Farrell J, Gennert D, et al (2015) <doi:10.1038/nbt.3192>, Macosko E, Basu A, Satija R, et al (2015) <doi:10.1016/j.cell.2015.05.002>, Stuart T, Butler A, et al (2019) <doi:10.1016/j.cell.2019.05.031>, and Hao, Hao, et al (2020) <doi:10.1101/2020.10.12.335331> for more details.

Paul Hoffman

Seurat

Tools for Single Cell Genomics

Andrew Butler

Saket Choudhary

Charlotte Darby

Jeff Farrell

Isabella Grabski

Christoph Hafemeister

Yuhan Hao

Austin Hartman

Jaison Jain

Longda Jiang

Madeline Kowalski

Skylar Li

Gesmira Molla

Efthymia Papalexi

Patrick Roelli

Rahul Satija

Karthik Shekhar

Avi Srivastava

Tim Stuart

Kristof Torkenczy

Shiwei Zheng

Satija Lab and Collaborators 

Read10X_probe_metadata function

<dl><dt>data.dir</dt>
<dd>The directory where the file is located.</dd>
<dt>filename</dt>
<dd>The name of the file containing the raw probe barcode matrix in HDF5 format. The default filename is 'raw_probe_bc_matrix.h5'.</dd></dl>

Arguments

Read10x Probe Metadata — Read10X_probe_metadata

<dl>

<dt>data.dir</dt>
<dd>The directory where the file is located.</dd>


<dt>filename</dt>
<dd>The name of the file containing the raw probe barcode matrix in HDF5 format. The default filename is 'raw_probe_bc_matrix.h5'.</dd>

</dl>

Read10x Probe Metadata

Read10X_probe_metadata: Read10x Probe Metadata

Description

Usage

Value

Arguments