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Visualize top genes associated with reduction components
VizDimLoadings( object, dims = 1:5, nfeatures = 30, col = "blue", reduction = "pca", projected = FALSE, balanced = FALSE, ncol = NULL, combine = TRUE )
A patchwork ggplot object if combine = TRUE; otherwise, a list of ggplot objects
patchwork
combine = TRUE
Seurat object
Number of dimensions to display
Number of genes to display
Color of points to use
Reduction technique to visualize results for
Use reduction values for full dataset (i.e. projected dimensional reduction values)
Return an equal number of genes with + and - scores. If FALSE (default), returns the top genes ranked by the scores absolute values
Number of columns to display
Combine plots into a single patchwork ggplot object. If FALSE, return a list of ggplot objects
FALSE
data("pbmc_small") VizDimLoadings(object = pbmc_small)
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