CreateCentroids

Create a <code>Centroids</code> Objects

Defines S4 classes for single-cell genomic data and associated
information, such as dimensionality reduction embeddings, nearest-neighbor
graphs, and spatially-resolved coordinates. Provides data access methods and
R-native hooks to ensure the Seurat object is familiar to other R users. See
Satija R, Farrell J, Gennert D, et al (2015) <doi:10.1038/nbt.3192>,
Macosko E, Basu A, Satija R, et al (2015) <doi:10.1016/j.cell.2015.05.002>,
and Stuart T, Butler A, et al (2019) <doi:10.1016/j.cell.2019.05.031> for
more details.

Paul Hoffman

SeuratObject

Data Structures for Single Cell Data

Rahul Satija

Andrew Butler

Tim Stuart

Jeff Farrell

Shiwei Zheng

Christoph Hafemeister

Patrick Roelli

Yuhan Hao

CreateCentroids function

<dl><dt>coords</dt>
<dd>The coordinates of cell/spot centroids</dd>
<dt>nsides</dt>
<dd>The number of sides to represent cells/spots; pass
<code><a href="/link/Inf?package=SeuratObject&version=4.1.4" data-mini-rdoc="SeuratObject::Inf">Inf</a></code> to plot as circles</dd>
<dt>radius</dt>
<dd>Radius of shapes when plotting</dd>
<dt>theta</dt>
<dd>Angle to adjust shapes when plotting</dd></dl>

Arguments

Create a Centroids Objects — CreateCentroids

<dl>

<dt>coords</dt>
<dd>The coordinates of cell/spot centroids</dd>


<dt>nsides</dt>
<dd>The number of sides to represent cells/spots; pass
<code><a href='https://rdrr.io/r/base/is.finite.html'>Inf</a></code> to plot as circles</dd>


<dt>radius</dt>
<dd>Radius of shapes when plotting</dd>


<dt>theta</dt>
<dd>Angle to adjust shapes when plotting</dd>

</dl>

Create a <code>Centroids</code> Objects

CreateCentroids: Create a `Centroids` Objects

Description

Usage

Value

Arguments