CellsByImage

Get a vector of cell names associated with an image (or set of images)

Defines S4 classes for single-cell genomic data and associated
information, such as dimensionality reduction embeddings, nearest-neighbor
graphs, and spatially-resolved coordinates. Provides data access methods and
R-native hooks to ensure the Seurat object is familiar to other R users. See
Satija R, Farrell J, Gennert D, et al (2015) <doi:10.1038/nbt.3192>,
Macosko E, Basu A, Satija R, et al (2015) <doi:10.1016/j.cell.2015.05.002>,
and Stuart T, Butler A, et al (2019) <doi:10.1016/j.cell.2019.05.031>,
Hao Y, Hao S, et al (2021) <doi:10.1016/j.cell.2021.04.048> and
Hao Y, et al (2023) <doi:10.1101/2022.02.24.481684> for
more details.

Paul Hoffman

SeuratObject

Data Structures for Single Cell Data

Rahul Satija

David Collins

Yuhan Hao

Austin Hartman

Gesmira Molla

Andrew Butler

Tim Stuart

Madeline Kowalski

Saket Choudhary

Skylar Li

Longda Jiang

Jeff Farrell

Shiwei Zheng

Christoph Hafemeister

Patrick Roelli

CellsByImage function

<dl><dt>object</dt>
<dd>Seurat object</dd>
<dt>images</dt>
<dd>Vector of image names</dd>
<dt>unlist</dt>
<dd>Return as a single vector of cell names as opposed to a list,
named by image name.</dd></dl>

Arguments

Get a vector of cell names associated with an image (or set of images) — CellsByImage

<dl>

<dt>object</dt>
<dd>Seurat object</dd>


<dt>images</dt>
<dd>Vector of image names</dd>


<dt>unlist</dt>
<dd>Return as a single vector of cell names as opposed to a list,
named by image name.</dd>

</dl>

Get a vector of cell names associated with an image (or set of images)

CellsByImage: Get a vector of cell names associated with an image (or set of images)

Description

Usage

Value

Arguments

Examples