FilterObjects

Get the names of objects within a <code>Seurat</code> object that are of a
certain class

Defines S4 classes for single-cell genomic data and associated
information, such as dimensionality reduction embeddings, nearest-neighbor
graphs, and spatially-resolved coordinates. Provides data access methods and
R-native hooks to ensure the Seurat object is familiar to other R users. See
Satija R, Farrell J, Gennert D, et al (2015) <doi:10.1038/nbt.3192>,
Macosko E, Basu A, Satija R, et al (2015) <doi:10.1016/j.cell.2015.05.002>,
and Stuart T, Butler A, et al (2019) <doi:10.1016/j.cell.2019.05.031>,
Hao Y, Hao S, et al (2021) <doi:10.1016/j.cell.2021.04.048> and
Hao Y, et al (2023) <doi:10.1101/2022.02.24.481684> for
more details.

Paul Hoffman

SeuratObject

Data Structures for Single Cell Data

Rahul Satija

David Collins

Yuhan Hao

Austin Hartman

Gesmira Molla

Andrew Butler

Tim Stuart

Madeline Kowalski

Saket Choudhary

Skylar Li

Longda Jiang

Jeff Farrell

Shiwei Zheng

Christoph Hafemeister

Patrick Roelli

FilterObjects function

<dl><dt>object</dt>
<dd>A <code>Seurat</code> object</dd>
<dt>classes.keep</dt>
<dd>A vector of names of classes to get</dd></dl>

Arguments

lifecycle::badge("deprecated")
<code>FilterObjects</code> was deprecated in version 5.0.0; use <code>.FilterObjects</code> instead

Lifecycle

Find Sub-objects of a Certain Class — FilterObjects

<dl>

<dt>object</dt>
<dd>A <code>Seurat</code> object</dd>


<dt>classes.keep</dt>
<dd>A vector of names of classes to get</dd>

</dl>

lifecycle::badge("deprecated")
<code>FilterObjects</code> was deprecated in version 5.0.0; use <code>.FilterObjects</code> instead

Find Sub-objects of a Certain Class

FilterObjects: Find Sub-objects of a Certain Class

Description

Usage

Value

Arguments

Lifecycle

Examples