LogMap-validity

Validation of <code>LogMap</code> objects is handled by
<code><a href="/link/validObject?package=SeuratObject&version=5.0.2" data-mini-rdoc="SeuratObject::validObject">validObject</a></code>

Defines S4 classes for single-cell genomic data and associated
information, such as dimensionality reduction embeddings, nearest-neighbor
graphs, and spatially-resolved coordinates. Provides data access methods and
R-native hooks to ensure the Seurat object is familiar to other R users. See
Satija R, Farrell J, Gennert D, et al (2015) <doi:10.1038/nbt.3192>,
Macosko E, Basu A, Satija R, et al (2015) <doi:10.1016/j.cell.2015.05.002>,
and Stuart T, Butler A, et al (2019) <doi:10.1016/j.cell.2019.05.031>,
Hao Y, Hao S, et al (2021) <doi:10.1016/j.cell.2021.04.048> and
Hao Y, et al (2023) <doi:10.1101/2022.02.24.481684> for
more details.

Paul Hoffman

SeuratObject

Data Structures for Single Cell Data

Rahul Satija

David Collins

Yuhan Hao

Austin Hartman

Gesmira Molla

Andrew Butler

Tim Stuart

Madeline Kowalski

Saket Choudhary

Skylar Li

Longda Jiang

Jeff Farrell

Shiwei Zheng

Christoph Hafemeister

Patrick Roelli

LogMap-validity function

Logical maps must be a logical matrix containing only TRUE or FALSE values

Data Validation

All values must be named within the rownames of the object. Duplicate or
empty (<code>""</code>) values are not allowed

Value Validation

All observations must be named within the column names of the object.
Duplicate or empty (<code>""</code>) observations are not allowed

Observation Validation

Validation of <code>LogMap</code> objects is handled by
<code><a href='https://rdrr.io/r/methods/validObject.html'>validObject</a></code>

Logical Map Validity — LogMap-validity

Logical maps must be a logical matrix containing only TRUE or FALSE values

All values must be named within the rownames of the object. Duplicate or
empty (<code>""</code>) values are not allowed

All observations must be named within the column names of the object.
Duplicate or empty (<code>""</code>) observations are not allowed

LogMap-validity: Logical Map Validity

Description

Arguments

Data Validation

Value Validation

Observation Validation

See Also

Examples