StitchMatrix

Defines S4 classes for single-cell genomic data and associated
information, such as dimensionality reduction embeddings, nearest-neighbor
graphs, and spatially-resolved coordinates. Provides data access methods and
R-native hooks to ensure the Seurat object is familiar to other R users. See
Satija R, Farrell J, Gennert D, et al (2015) <doi:10.1038/nbt.3192>,
Macosko E, Basu A, Satija R, et al (2015) <doi:10.1016/j.cell.2015.05.002>,
and Stuart T, Butler A, et al (2019) <doi:10.1016/j.cell.2019.05.031>,
Hao Y, Hao S, et al (2021) <doi:10.1016/j.cell.2021.04.048> and
Hao Y, et al (2023) <doi:10.1101/2022.02.24.481684> for
more details.

Paul Hoffman

SeuratObject

Data Structures for Single Cell Data

Rahul Satija

David Collins

Yuhan Hao

Austin Hartman

Gesmira Molla

Andrew Butler

Tim Stuart

Madeline Kowalski

Saket Choudhary

Skylar Li

Longda Jiang

Jeff Farrell

Shiwei Zheng

Christoph Hafemeister

Patrick Roelli

StitchMatrix function

<dl><dt>x</dt>
<dd>A matrix</dd>
<dt>y</dt>
<dd>One or more matrices of the same class or coercible to the
same class as <code>x</code></dd>
<dt>rowmap, colmap</dt>
<dd><code>LogMaps</code> describing the row and cell
membership of each matrix; the <code>LogMap</code> entries are assumed to be in
the order of <code>c(x, y)</code></dd>
<dt>...</dt>
<dd>Arguments passed to other methods</dd></dl>

Arguments

Stitch Matrices Together — StitchMatrix

<dl>

<dt>x</dt>
<dd>A matrix</dd>


<dt>y</dt>
<dd>One or more matrices of the same class or coercible to the
same class as <code>x</code></dd>


<dt>rowmap, colmap</dt>
<dd><code>LogMaps</code> describing the row and cell
membership of each matrix; the <code>LogMap</code> entries are assumed to be in
the order of <code>c(x, y)</code></dd>


<dt>...</dt>
<dd>Arguments passed to other methods</dd>

</dl>

Stitch Matrices Together

StitchMatrix: Stitch Matrices Together

Description

Usage

Value

Arguments