print.DimReduc

print

Prints a set of features that most strongly define a set of components;
note: requires feature loadings to be present in order to work

Defines S4 classes for single-cell genomic data and associated
information, such as dimensionality reduction embeddings, nearest-neighbor
graphs, and spatially-resolved coordinates. Provides data access methods and
R-native hooks to ensure the Seurat object is familiar to other R users. See
Satija R, Farrell J, Gennert D, et al (2015) <doi:10.1038/nbt.3192>,
Macosko E, Basu A, Satija R, et al (2015) <doi:10.1016/j.cell.2015.05.002>,
and Stuart T, Butler A, et al (2019) <doi:10.1016/j.cell.2019.05.031>,
Hao Y, Hao S, et al (2021) <doi:10.1016/j.cell.2021.04.048> and
Hao Y, et al (2023) <doi:10.1101/2022.02.24.481684> for
more details.

Paul Hoffman

SeuratObject

Data Structures for Single Cell Data

Rahul Satija

David Collins

Yuhan Hao

Austin Hartman

Gesmira Molla

Andrew Butler

Tim Stuart

Madeline Kowalski

Saket Choudhary

Skylar Li

Longda Jiang

Jeff Farrell

Shiwei Zheng

Christoph Hafemeister

Patrick Roelli

print.DimReduc function

<dl><dt>x</dt>
<dd>A <code>DimReduc</code> object</dd>
<dt>dims</dt>
<dd>Number of dimensions to display</dd>
<dt>nfeatures</dt>
<dd>Number of genes to display</dd>
<dt>projected</dt>
<dd>Use projected slot</dd>
<dt>...</dt>
<dd>Ignored</dd></dl>

Arguments

Print Top Feature Loadings — print.DimReduc

<dl>

<dt>x</dt>
<dd>A <code>DimReduc</code> object</dd>


<dt>dims</dt>
<dd>Number of dimensions to display</dd>


<dt>nfeatures</dt>
<dd>Number of genes to display</dd>


<dt>projected</dt>
<dd>Use projected slot</dd>


<dt>...</dt>
<dd>Ignored</dd>

</dl>

Print Top Feature Loadings

print.DimReduc: Print Top Feature Loadings

Description

Usage

Value

Arguments

See Also

Examples