Signac

Signac-package

<img src="figures/logo.png?package=Signac&version=1.10.0" style="float: right" alt="logo" width="120">
A framework for the analysis and exploration of single-cell chromatin data. The 'Signac' package contains functions for quantifying single-cell chromatin data, computing per-cell quality control metrics, dimension reduction and normalization, visualization, and DNA sequence motif analysis. Reference: Stuart et al. (2021) tools:::Rd_expr_doi("10.1038/s41592-021-01282-5").

A framework for the analysis and exploration of single-cell chromatin data.
The 'Signac' package contains functions for quantifying single-cell chromatin data,
computing per-cell quality control metrics, dimension reduction
and normalization, visualization, and DNA sequence motif analysis.
Reference: Stuart et al. (2021) <doi:10.1038/s41592-021-01282-5>.

Tim Stuart

Analysis of Single-Cell Chromatin Data

Avi Srivastava

Paul Hoffman

Rahul Satija

Signac-package function

Maintainer: Tim Stuart <a href="/link/stuartt%40gis.a-star.edu.sg?package=Signac&version=1.10.0" data-mini-rdoc="Signac::stuartt@gis.a-star.edu.sg">stuartt@gis.a-star.edu.sg</a> (<a href="https://orcid.org/0000-0002-3044-0897">ORCID</a>)
Authors:<ul>
<li>Avi Srivastava <a href="/link/asrivastava%40nygenome.org?package=Signac&version=1.10.0" data-mini-rdoc="Signac::asrivastava@nygenome.org">asrivastava@nygenome.org</a> (<a href="https://orcid.org/0000-0001-9798-2079">ORCID</a>)</li>
</ul>Other contributors:<ul>
<li>Paul Hoffman <a href="/link/phoffman%40nygenome.org?package=Signac&version=1.10.0" data-mini-rdoc="Signac::phoffman@nygenome.org">phoffman@nygenome.org</a> (<a href="https://orcid.org/0000-0002-7693-8957">ORCID</a>) [contributor]</li>
<li>Rahul Satija <a href="/link/rsatija%40nygenome.org?package=Signac&version=1.10.0" data-mini-rdoc="Signac::rsatija@nygenome.org">rsatija@nygenome.org</a> (<a href="https://orcid.org/0000-0001-9448-8833">ORCID</a>) [contributor]</li>
</ul>

Author

<img src='figures/logo.png' style='float: right' alt='logo' width='120' />
A framework for the analysis and exploration of single-cell chromatin data. The 'Signac' package contains functions for quantifying single-cell chromatin data, computing per-cell quality control metrics, dimension reduction and normalization, visualization, and DNA sequence motif analysis. Reference: Stuart et al. (2021) tools:::Rd_expr_doi("10.1038/s41592-021-01282-5").

Signac: Analysis of Single-Cell Chromatin Data — Signac-package

Maintainer: Tim Stuart <a href='mailto:stuartt@gis.a-star.edu.sg'>stuartt@gis.a-star.edu.sg</a> (<a href='https://orcid.org/0000-0002-3044-0897'>ORCID</a>)
Authors:<ul>
<li>Avi Srivastava <a href='mailto:asrivastava@nygenome.org'>asrivastava@nygenome.org</a> (<a href='https://orcid.org/0000-0001-9798-2079'>ORCID</a>)</li>
</ul>

Other contributors:<ul>
<li>Paul Hoffman <a href='mailto:phoffman@nygenome.org'>phoffman@nygenome.org</a> (<a href='https://orcid.org/0000-0002-7693-8957'>ORCID</a>) [contributor]</li>
<li>Rahul Satija <a href='mailto:rsatija@nygenome.org'>rsatija@nygenome.org</a> (<a href='https://orcid.org/0000-0001-9448-8833'>ORCID</a>) [contributor]</li>
</ul>

Signac-package: Signac: Analysis of Single-Cell Chromatin Data

Description

Arguments

Author

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