SnapATAC (version 1.0.0)

dim.reduct-class: An S4 class to represent dimentionality reduction object.

Description

Class defines a dim.reduct object.

Slots

imat

name of the input matrix (i.e. bmat, jmat, pmat, gmat)

dmat

a matrix object that contains reduced dimentions

sdev

variance for each principal conponents

iter

iterations used for running dimentionality reduction

method

a character object indicates the method used for dimentionality reduction

Examples

# NOT RUN {
data(demo.sp);
demo.sub.sp = demo.sp[1:5,]
# }