A data frame containing Solcap potato genotype data in tetraploid and diploid format as an small example of the input format required by StAMPP
data(potato.mini)
A data frame with 6 observations on the following 48 variables.
Sample
a factor with levels ind1
ind106
ind140
ind141
ind142
ind143
ind144
ind15
ind16
ind161
ind162
ind17
ind18
ind2
ind257
ind258
ind259
ind290
ind291
ind292
ind293
ind294
ind295
ind296
ind3
ind4
ind5
ind6
ind94
ind95
Pop
a factor with levels 2x_A_Population
4x_B_Population
4x_C_Population
Ploidy
a numeric vector
Format
a factor with levels BiA
solcap_snp_c1_1
a factor with levels AA
AAAA
AAAB
AABB
AB
solcap_snp_c1_1000
a factor with levels AAAB
AABB
AB
ABBB
BB
BBBB
solcap_snp_c1_10000
a factor with levels AA
AAAB
AABB
AB
ABBB
BBBB
solcap_snp_c1_10001
a factor with levels AAAA
AAAB
AABB
AB
ABBB
BB
BBBB
solcap_snp_c1_10011
a factor with levels AA
AB
ABBB
BBBB
solcap_snp_c1_10012
a factor with levels AAAA
AAAB
AB
BB
solcap_snp_c1_10031
a factor with levels AA
AAAA
AAAB
AABB
AB
ABBB
BBBB
solcap_snp_c1_10042
a factor with levels AB
ABBB
BB
BBBB
solcap_snp_c1_10050
a factor with levels AB
BB
BBBB
solcap_snp_c1_10054
a factor with levels AA
AAAA
AAAB
AABB
ABBB
solcap_snp_c1_10109
a factor with levels AA
AAAA
AAAB
AABB
AB
ABBB
BBBB
solcap_snp_c1_10130
a factor with levels -9
AA
AAAA
AAAB
AABB
AB
ABBB
solcap_snp_c1_10157
a factor with levels AABB
AB
ABBB
BB
BBBB
solcap_snp_c1_10202
a factor with levels AABB
AB
ABBB
BB
BBBB
solcap_snp_c1_10252
a factor with levels AA
AAAA
AAAB
AABB
ABBB
solcap_snp_c1_10253
a factor with levels AA
AAAA
AAAB
AABB
ABBB
solcap_snp_c1_10255
a factor with levels AAAB
AABB
AB
ABBB
BB
BBBB
solcap_snp_c1_1029
a factor with levels AA
AAAB
AABB
ABBB
solcap_snp_c1_10295
a factor with levels AA
AAAA
AAAB
AABB
solcap_snp_c1_10297
a factor with levels -9
AA
AAAB
AABB
AB
ABBB
BBBB
solcap_snp_c1_10351
a factor with levels AAAB
AABB
ABBB
BB
BBBB
solcap_snp_c1_10384
a factor with levels AA
AAAA
AAAB
AABB
AB
ABBB
solcap_snp_c1_10397
a factor with levels AA
AAAA
AAAB
AABB
ABBB
solcap_snp_c1_10457
a factor with levels AAAB
AABB
ABBB
BB
BBBB
solcap_snp_c1_10491
a factor with levels AABB
AB
ABBB
BB
BBBB
solcap_snp_c1_10492
a factor with levels AABB
AB
ABBB
BB
BBBB
solcap_snp_c1_10494
a factor with levels AAAA
AAAB
AB
BB
BBBB
solcap_snp_c1_10579
a factor with levels AA
AAAB
AABB
AB
ABBB
BBBB
solcap_snp_c1_10646
a factor with levels AA
AAAA
AAAB
AABB
solcap_snp_c1_10669
a factor with levels AA
AAAA
AAAB
AABB
AB
solcap_snp_c1_10715
a factor with levels AA
AAAA
AAAB
AABB
ABBB
solcap_snp_c1_10737
a factor with levels AABB
AB
ABBB
BB
BBBB
solcap_snp_c1_10743
a factor with levels -9
AABB
AB
ABBB
BB
BBBB
solcap_snp_c1_10762
a factor with levels AA
AAAA
AAAB
AABB
AB
ABBB
solcap_snp_c1_10855
a factor with levels AA
AAAB
AABB
AB
ABBB
BBBB
solcap_snp_c1_10873
a factor with levels AA
AAAA
AAAB
AABB
AB
ABBB
BBBB
solcap_snp_c1_10879
a factor with levels -9
AAAB
AABB
AB
ABBB
BB
solcap_snp_c1_10900
a factor with levels AA
AAAA
AAAB
AABB
AB
ABBB
solcap_snp_c1_10932
a factor with levels AA
AAAA
AAAB
AABB
ABBB
solcap_snp_c1_1094
a factor with levels AAAA
AAAB
AABB
AB
ABBB
BB
solcap_snp_c1_11137
a factor with levels AA
AAAA
AAAB
AABB
ABBB
solcap_snp_c1_11144
a factor with levels AA
AAAA
AAAB
AABB
ABBB
solcap_snp_c1_11196
a factor with levels AA
AAAA
AAAB
AABB
AB
solcap_snp_c1_11206
a factor with levels AAAB
AABB
ABBB
BB
BBBB
# NOT RUN {
data(potato.mini, package="StAMPP")
# }
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