Tropical.HC.AGNES

This function performs agglomerative (AGNES) hierarchical clustering over the
space of ultrametrics defining the space of equidistant trees

Suite of tropical geometric tools for use in machine learning applications. These methods may be summarized in the following references: Yoshida, et al. (2022) <doi:10.2140/astat.2023.14.37>, Barnhill et al. (2023) <doi:10.48550/arXiv.2303.02539>, Barnhill and Yoshida (2023) <doi:10.3390/math11153433>, Aliatimis et al. (2023) <doi:10.1007/s11538-024-01327-8>, Yoshida et al. (2022) <doi:10.1109/TCBB.2024.3420815>, and Yoshida et al. (2019) <doi:10.1007/s11538-018-0493-4>.

David Barnhill

Tropical Geometry Tools for Machine Learning

Ruriko Yoshida

Georgios Aliatimis

Keiji Miura

Tropical.HC.AGNES function

<dl><dt>D</dt>
<dd>matrix of points defining a tropical polytope. Rows are the
tropical points</dd>
<dt>method</dt>
<dd>linkage method: mean, min, or max</dd></dl>

Arguments

David Barnhill <a href="/link/david.barnhill%40nps.edu?package=TML&version=2.3.0" data-mini-rdoc="TML::david.barnhill@nps.edu">david.barnhill@nps.edu</a>

Author

Agglomerative (AGNES) tropical hierarchical clustering — Tropical.HC.AGNES

<dl>

<dt>D</dt>
<dd>matrix of points defining a tropical polytope. Rows are the
tropical points</dd>


<dt>method</dt>
<dd>linkage method: mean, min, or max</dd>

</dl>

David Barnhill <a href='mailto:david.barnhill@nps.edu'>david.barnhill@nps.edu</a>

Tropical.HC.AGNES: Agglomerative (AGNES) tropical hierarchical clustering

Description

Usage

Value

Arguments

Author

References

Examples