UCSCXenaShiny (version 2.1.0)

ezcor_batch: Run correlation between two variables in a batch mode and support group by a variable

Description

Run correlation between two variables in a batch mode and support group by a variable

Usage

ezcor_batch(
  data,
  var1,
  var2,
  split = FALSE,
  split_var = NULL,
  cor_method = "pearson",
  adjust_method = "none",
  use = "complete",
  sig_label = TRUE,
  parallel = FALSE,
  verbose = FALSE
)

Value

a data.frame

Arguments

data

a data.frame containing variables

var1

a character, the first variable in correlation

var2

a character, the second variable in correlation

split

whether perform correlation grouped by a variable, default is 'FALSE'

split_var

a character, the group variable

cor_method

method="pearson" is the default value. The alternatives to be passed to cor are "spearman" and "kendall"

adjust_method

What adjustment for multiple tests should be used? ("holm", "hochberg", "hommel", "bonferroni", "BH", "BY", "fdr", "none")

use

use="pairwise" will do pairwise deletion of cases. use="complete" will select just complete cases

sig_label

whether add symbal of significance. P < 0.001,***; P < 0.01,**; P < 0.05,*; P >=0.05,""

parallel

if TRUE, do parallel computation by furrr package.

verbose

if TRUE, print extra info.

Author

Yi Xiong, Shixiang Wang