VDAP (version 2.0.0)

Dups: Average duplicated peptides from a VDAP dataset

Description

Looks for duplicate peptides in the first column of the dataset, averages the signal of duplicates and replaces them with a single row. A subfunction of vFormat

Usage

Dups(x)

Arguments

x

An R object, generally a data.frame with peptides in column 1, followed by signal values at various concentrations.

Value

Returns a data.frame without duplicated peptides. Duplicate entries display the mean of the signal at each concentration

Examples

protExDups <- data.frame(Peptides = c("PWRGPWARVGSG","GYNRVGQGSG","PWRGPWARVGSG"),
C_6uM = c(65011.48,47462.24,24778), C_3uM = c(62637.81,31899.85,21313.67),
C_1.5uM = c(57893.22,25911.35,10397.99))

exDups <- Dups(protExDups)