class:VRangesList

VRangesList-class

CompressedVRangesList-class

class:CompressedVRangesList

SimpleVRangesList-class

class:SimpleVRangesList

VRangesList

stackSamples

stackSamples,VRangesList-method


  VRangesList is a virtual class representing a list of
  <code>VRanges</code> objects and should behave much like any
  other derivative of <code>List</code>. It has both a simple and
  compressed implementation. VRangesList provides conveniences for
  manipulating sets of <code>VRanges</code> objects.


Annotate variants, compute amino acid coding changes,
predict coding outcomes.

Bioconductor Package Maintainer

VariantAnnotation

Annotation of Genetic Variants

VRangesList-class function

<dl>
    <dt></dt><dd>
      <code>VRangesList(...)</code>:
      Creates a VRangesList object from <code>VRanges</code> objects in ....
    </dd> </dl> 

Constructor

<dl>
    <dt></dt><dd>
      <code>stackSamples(x)</code>: Concentrates the elements in <code>x</code>,
      using <code>names(x)</code> to appropriately fill <code>sampleNames</code> in
      the result.
    </dd> </dl> 

Utilities

VRangesList objects

VRangesList-class: VRangesList objects

Description

Arguments

Constructor

Utilities

Examples