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WGCNA (version 1.43)

branchSplit.dissim: Branch split based on dissimilarity.

Description

Calculation of branch split based on a dissimilarity matrix. This function is used as a plugin for the dynamicTreeCut package and the user should not call this function directly. This function is experimental and subject to change.

Usage

branchSplit.dissim(
  dissimMat, 
  branch1, branch2, 
  upperP, 
  minNumberInSplit = 5, 
  getDetails = FALSE, ...)

Arguments

dissimMat
Dissimilarity matrix.
branch1
Branch 1.
branch2
Branch 2.
upperP
Percentile of (closest) objects to be considered.
minNumberInSplit
Minimum number of objects to be considered.
getDetails
Should details of the calculation be returned?
...
Other arguments for compatibility; currently unused.

Value

  • A single number or a list containing details of the calculation.