GTOMdist

Generalized Topological Overlap Measure, taking into account interactions of higher degree.

 misc 

Functions necessary to perform Weighted Correlation Network Analysis on high-dimensional data as originally described in Horvath and Zhang (2005) <doi:10.2202/1544-6115.1128> and Langfelder and Horvath (2008) <doi:10.1186/1471-2105-9-559>. Includes functions for rudimentary data cleaning, construction of correlation networks, module identification, summarization, and relating of variables and modules to sample traits. Also includes a number of utility functions for data manipulation and visualization.

Peter Langfelder

WGCNA

Weighted Correlation Network Analysis

Steve Horvath

Chaochao Cai

Jun Dong

Jeremy Miller

Lin Song

Andy Yip

Bin Zhang

GTOMdist function

<dl> <dt>adjMat</dt>
<dd>adjacency matrix. See details below.</dd> <dt>degree</dt>
<dd>integer specifying the maximum degree to be calculated.</dd></dl>

Arguments

Author

Generalized Topological Overlap Measure — GTOMdist

<dl>

 <dt>adjMat</dt>
<dd>adjacency matrix. See details below.</dd>

 <dt>degree</dt>
<dd>integer specifying the maximum degree to be calculated.</dd>

</dl>

Generalized Topological Overlap Measure

GTOMdist: Generalized Topological Overlap Measure

Description

Usage

Value

Arguments

Author

References