clusterCoef

This function calculates the clustering coefficients for all nodes in the network given by the input
adjacency matrix.

 misc 

Functions necessary to perform Weighted Correlation Network Analysis on high-dimensional data as originally described in Horvath and Zhang (2005) <doi:10.2202/1544-6115.1128> and Langfelder and Horvath (2008) <doi:10.1186/1471-2105-9-559>. Includes functions for rudimentary data cleaning, construction of correlation networks, module identification, summarization, and relating of variables and modules to sample traits. Also includes a number of utility functions for data manipulation and visualization.

Peter Langfelder

WGCNA

Weighted Correlation Network Analysis

Steve Horvath

Chaochao Cai

Jun Dong

Jeremy Miller

Lin Song

Andy Yip

Bin Zhang

clusterCoef function

<dl> <dt>adjMat</dt>
<dd>adjacency matrix</dd></dl>

Arguments

Author

Clustering coefficient calculation — clusterCoef

<dl>

 <dt>adjMat</dt>
<dd>adjacency matrix</dd>

</dl>

Clustering coefficient calculation

clusterCoef: Clustering coefficient calculation

Description

Usage

Value

Arguments

Author